CDS

Accession Number TCMCG017C23863
gbkey CDS
Protein Id OMO75157.1
Location complement(15780..16727)
GeneID InterPro:IPR003107
Organism Corchorus olitorius
locus_tag COLO4_26266

Protein

Length 315aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019228.1
Definition RNA-processing protein, HAT helix [Corchorus olitorius]
Locus_tag COLO4_26266

EGGNOG-MAPPER Annotation

COG_category D
Description spliceosomal complex assembly
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12869        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000381        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000974        [VIEW IN EMBL-EBI]
GO:0001655        [VIEW IN EMBL-EBI]
GO:0001742        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0007272        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007417        [VIEW IN EMBL-EBI]
GO:0007420        [VIEW IN EMBL-EBI]
GO:0007438        [VIEW IN EMBL-EBI]
GO:0007442        [VIEW IN EMBL-EBI]
GO:0007443        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008347        [VIEW IN EMBL-EBI]
GO:0008366        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0021537        [VIEW IN EMBL-EBI]
GO:0021543        [VIEW IN EMBL-EBI]
GO:0021987        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030900        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042063        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048546        [VIEW IN EMBL-EBI]
GO:0048565        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048619        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055123        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060322        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060562        [VIEW IN EMBL-EBI]
GO:0061326        [VIEW IN EMBL-EBI]
GO:0061333        [VIEW IN EMBL-EBI]
GO:0061525        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070848        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071007        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071012        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071014        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071363        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072001        [VIEW IN EMBL-EBI]
GO:0072002        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1990089        [VIEW IN EMBL-EBI]
GO:1990090        [VIEW IN EMBL-EBI]
GO:1990416        [VIEW IN EMBL-EBI]
GO:1990823        [VIEW IN EMBL-EBI]
GO:1990830        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTCATCGCGTTTCTGTCAAGCCTAAAAACAAGGCTGCCAACCCTATTCAGATTACGGCTGAGCACATCGTCGCCAACGCTCGCCATCTCAGTGATGCGGCGGTCCAACGTCCGGCGAAACGAAAGTTGGTCGACATTGATGAGGTGGATGACTACCGACTAAAAAAGCGTAAGGAGTTCGAAGACAATATTTCCCGGCACAGAGGAGACACGAGTCTATGGATCAAATACGCCCAATGGGAAGCCTTGCAGAAGGAATTTAACCGAGCACGGAGCGTGTGGGAGAGAGCATTGGAATTGGATTACAAAAACCATAAGTTGTGGCTCAACTACGCTGAATTCGAGATGAAGAATAGGTTCATAAACCATGCTCGTAACATCTTTGACCGCGCCATCACTATTCTCCCTCGCGTTGATCAGCTGTGGTTGAAGTACATTCACATGGAGGAGATGGTCGGTAACATTGCTGGGTCTCGCCAAATCTTCGAAAGGTGGATGGATTGGATGCCCGATCAACAGGCTTGGTCCTCCTACATTAATTTTGAGCTTCGCTACAAGGAGCTGGACCGTGCTCGATGCCTTTACGAGCGGTTGGTTGAGTGTCACCCTAGGACGGTTAGCGTGTGGATCAAATATGCAAAATTTGAGATGAAAAACTCAGAATTAGACTCTGCCAGACGTATCTATGAACGTGCTTTGGACAAGTTTAGCTTGGATGATCGTGAAACTCAGAAACTATTTCTTGCGTTTGCAGAGTTTGAAGTCCTCTGTCATGAGATTGAGAGAGCTCGTTGCATCTATGAGTTTGCCATTGATAATTTGGGCAAGGCCAAGGCAGAGGAGTTGTGTAGCAAATTTGTGGCGTTTGAGTTTCAATATGGAAATGGGAAGCAGATTGATGATGCCATTCTCAGGAAAAGAAGCTTAAATATCCAAGCAGATTGA
Protein:  
MSHRVSVKPKNKAANPIQITAEHIVANARHLSDAAVQRPAKRKLVDIDEVDDYRLKKRKEFEDNISRHRGDTSLWIKYAQWEALQKEFNRARSVWERALELDYKNHKLWLNYAEFEMKNRFINHARNIFDRAITILPRVDQLWLKYIHMEEMVGNIAGSRQIFERWMDWMPDQQAWSSYINFELRYKELDRARCLYERLVECHPRTVSVWIKYAKFEMKNSELDSARRIYERALDKFSLDDRETQKLFLAFAEFEVLCHEIERARCIYEFAIDNLGKAKAEELCSKFVAFEFQYGNGKQIDDAILRKRSLNIQAD